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1

Human DNA methylomes at base resolution show widespread epigenomic differences

Lister, Ryan, Pelizzola, Mattia, Dowen, Robert H., Hawkins, R. David, Hon, Gary, Tonti-Filippini, Julian, Nery, Joseph R., Lee, Leonard, Ye, Zhen, Ngo, Que-Minh

Journal:

Year:

2009

Language:

english

File:

PDF, 1.42 MB

english, 2009

2

From the Cover: PNAS Plus: Widespread dynamic DNA methylation in response to biotic stress

Dowen, R. H., Pelizzola, M., Schmitz, R. J., Lister, R., Dowen, J. M., Nery, J. R., Dixon, J. E., Ecker, J. R.

Journal:

Proceedings of the National Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 6.25 MB

english, 2012

3

Critical temperature of two coupled Ising planes

Pelizzola, Alessandro

Journal:

Physical Review B

Year:

1995

Language:

english

File:

PDF, 48 KB

english, 1995

4

Degradation dynamics of microRNAs revealed by a novel pulse-chase approach

Marzi, Matteo J, Ghini, Francesco, Cerruti, Benedetta, de Pretis, Stefano, Bonetti, Paola, Giacomelli, Chiara, Gorski, Marcin G, Kress, Theresia, Pelizzola, Mattia, Muller, Heiko, Amati, Bruno, Nicass

Journal:

Genome Research

Year:

2016

Language:

english

File:

PDF, 5.84 MB

english, 2016

5

Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

Chang, Katherine Noelani, Zhong, Shan, Weirauch, Matthew T, Hon, Gary, Pelizzola, Mattia, Li, Hai, Huang, Shao-shan Carol, Schmitz, Robert J, Urich, Mark A, Kuo, Dwight, Nery, Joseph R, Qiao, Hong, Ya

Journal:

Year:

2013

Language:

english

File:

PDF, 1.15 MB

english, 2013

6

Aproximaciones transdisciplinarias a Un soplo de vida, pulsaciones de Clarice Lispector

Bornhauser Neuber, Niklas, Bravo Pelizzola, Valentina

Journal:

Year:

2010

File:

PDF, 128 KB

2010

7

Study on the sugar content of blue-veined “Gorgonzola” PDO cheese

Monti, Lucia, Pelizzola, Valeria, Povolo, Milena, Fontana, Stefano, Contarini, Giovanna

Journal:

International Dairy Journal

Year:

2019

File:

PDF, 762 KB

2019

8

A critical role for lipophosphoglycan in proinflammatory responses of dendritic cells to Leishmania mexicana

Toni Aebischer, Clare L. Bennett, Mattia Pelizzola, Caterina Vizzardelli, Norman Pavelka, Matteo Urbano, Monica Capozzoli, Alessandra Luchini, Thomas Ilg, Francesca Granucci, C. Clare Blackburn, Paola

Journal:

European Journal of Immunology

Year:

2005

Language:

english

File:

PDF, 424 KB

english, 2005

9

Effects of dexamethazone on LPS-induced activationand migration of mouse dendritic cells revealed by a genome-wide transcriptional analysis

Caterina Vizzardelli, Norman Pavelka, Alessandra Luchini, Ivan Zanoni, Lee Bendickson, Mattia Pelizzola, Ottavio Beretta, Maria Foti, Francesca Granucci, Marit Nilsen-Hamilton, Paola Ricciardi-Castagn

Journal:

European Journal of Immunology

Year:

2006

Language:

english

File:

PDF, 558 KB

english, 2006

10

Directly resistively heated-column gas chromatography for the evaluation of cow milk fat purity

Milena Povolo, Valeria Pelizzola, Giovanna Contarini

Journal:

European Journal of Lipid Science and Technology

Year:

2008

Language:

english

File:

PDF, 308 KB

english, 2008

11

Multicritical points and reentrant phenomenon in the BEG model

Carla Buzano, Alessandro Pelizzola

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1992

Language:

english

File:

PDF, 534 KB

english, 1992

12

Surface reentrance in the semi-infinite spin-1 Ising models

Carla Buzano, Alessandro Pelizzola

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1993

Language:

english

File:

PDF, 664 KB

english, 1993

13

On three new cluster variation approximations

Alessandro Pelizzola

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1994

Language:

english

File:

PDF, 666 KB

english, 1994

14

New topologies in the phase diagram of the semi-infinite Blume-Capel model

Carla Buzano, Alessandro Pelizzola

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1995

Language:

english

File:

PDF, 436 KB

english, 1995

15

The phase diagram of the gonihedric 3d Ising model via CVM

E.N.M Cirillo, G Gonnella, D.A Johnston, A Pelizzola

Journal:

Physics Letters A

Year:

1997

Language:

english

File:

PDF, 570 KB

english, 1997

16

Partial integration and local mean field approach for a vector lattice model of microemulsions: unbalanced case

C Buzano, A Pelizzola, M Pretti

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1999

Language:

english

File:

PDF, 232 KB

english, 1999

17

Deriving exact results for Ising-like models from the cluster variation method

Alessandro Pelizzola

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2000

Language:

english

File:

PDF, 182 KB

english, 2000

18

Computational protein design with side-chain conformational entropy

Daniele Sciretti, Pierpaolo Bruscolini, Alessandro Pelizzola, Marco Pretti, Alfonso Jaramillo

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 228 KB

english, 2009

19

A new active model lung

G. Damia, M. Cigada, M. Solca, A. Pelizzola

Journal:

Intensive Care Medicine

Year:

1988

Language:

english

File:

PDF, 440 KB

english, 1988

20

Comment on the paper “The importance of the circuit capacity in the administration of CPAP”

D. Mascheroni, R. Marcolin, A. Pelizzola, L. Gattinoni, G. Damia, J. Roeseler, M. Reynaert

Journal:

Intensive Care Medicine

Year:

1985

Language:

english

File:

PDF, 142 KB

english, 1985

21

The role of total static lung compliance in the management of severe ARDS unresponsive to conventional treatment

L. Gattinoni, A. Pesenti, M. L. Caspani, A. Pelizzola, D. Mascheroni, R. Marcolin, G. Iapichino, M. Langer, A. Agostoni, T. Kolobow, D. G. Melrose, G. Damia

Journal:

Intensive Care Medicine

Year:

1984

Language:

english

File:

PDF, 525 KB

english, 1984

22

Hemodynamics and renal function during low frequency positive pressure ventilation with extracorporeal CO2removal

L. Gattinoni, A. Agostoni, G. Damia, D. Cantaluppi, C. Bernasconi, L. Tarenzi, A. Pelizzola, G. P. Rossi

Journal:

Intensive Care Medicine

Year:

1980

Language:

english

File:

PDF, 656 KB

english, 1980

23

Determination of ErbB2 protein in breast cancer tissues by different methods. Relationships with other biological parameters

A. Piffanelli, R. Dittadi, L. Catozzi, M. Gion, G. Capitanio, M. C. Gelli, A. Brazzale, R. Malagutti, D. Pelizzola, A. Menegon, G. Giovannini, G. Gardini

Journal:

Breast Cancer Research and Treatment

Year:

1996

Language:

english

File:

PDF, 869 KB

english, 1996

24

Nonequilibrium work fluctuations in a driven Ising model

G. Gonnella, A. Pelizzola, L. Rondoni, G.P. Saracco

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2009

Language:

english

File:

PDF, 568 KB

english, 2009

25

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

Lister, Ryan, Pelizzola, Mattia, Kida, Yasuyuki S., Hawkins, R. David, Nery, Joseph R., Hon, Gary, Antosiewicz-Bourget, Jessica, O’Malley, Ronan, Castanon, Rosa, Klugman, Sarit

Journal:

Year:

2011

Language:

english

File:

PDF, 1.56 MB

english, 2011

26

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

Hon, G. C., Hawkins, R. D., Caballero, O. L., Lo, C., Lister, R., Pelizzola, M., Valsesia, A., Ye, Z., Kuan, S., Edsall, L. E.

Journal:

Genome Research

Year:

2012

Language:

english

File:

PDF, 2.83 MB

english, 2012

27

Testis cytological structure, plasma sex steroids, and gonad cytosol free steroid receptors of heterologous gonadotropin (hCG)-stimulated silver eel, Anguilla anguilla L

G. Colombo, G. Grandi, A. Romeo, G. Giovannini, D. Pelizzola, L. Catozzi, A. Piffanelli

Journal:

General and Comparative Endocrinology

Year:

1987

Language:

english

File:

PDF, 5.25 MB

english, 1987

28

CVM analysis of crossover in the semi-infinite Ising model

Alessandro Pelizzola

Journal:

Journal of Magnetism and Magnetic Materials

Year:

1995

Language:

english

File:

PDF, 144 KB

english, 1995

29

Temporal gene expression profile of the hippocampus following trace fear conditioning

Alessandra Sirri, Veronica Bianchi, Mattia Pelizzola, Manuel Mayhaus, Paola Ricciardi-Castagnoli, Daniela Toniolo, Patrizia D'Adamo

Journal:

Year:

2010

Language:

english

File:

PDF, 678 KB

english, 2010

30

The DNA methylome

Mattia Pelizzola, Joseph R. Ecker

Journal:

Year:

2011

Language:

english

File:

PDF, 473 KB

english, 2011

31

A power law global error model for the identification of differentially expressed genes in microarray data

Norman Pavelka, Mattia Pelizzola, Caterina Vizzardelli, Monica Capozzoli, Andrea Splendiani, Francesca Granucci, Paola Ricciardi-Castagnoli

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 1.62 MB

english, 2004

32

AMDA: an R package for the automated microarray data analysis

Mattia Pelizzola, Norman Pavelka, Maria Foti, Paola Ricciardi-Castagnoli

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 733 KB

english, 2006

33

The Genopolis Microarray Database

Andrea Splendiani, Marco Brandizi, Gael Even, Ottavio Beretta, Norman Pavelka, Mattia Pelizzola, Manuel Mayhaus, Maria Foti, Giancarlo Mauri, Paola Ricciardi-Castagnoli

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.02 MB

english, 2007

34

310 Quality assurance program for steroid receptor assays:the four year Italian experience

A. Piffanelli, D. Pelizzola, M. De Bortoli, G. Giovannini, G. Scaglianti, S. Fumero, A. Boreani, A. Carbone, C. Cocconi, G. Concolino, Rio Del, G. Di Fronzo, F. De Biase, F. Di Carlo, R. Frairia, L. F

Journal:

Journal of Steroid Biochemistry

Year:

1983

Language:

english

File:

PDF, 129 KB

english, 1983

35

Content of conjugated linoleic acid in neutral and polar lipid fractions of milk of different ruminant species

Giovanna Contarini, Valeria Pelizzola, Milena Povolo

Journal:

International Dairy Journal

Year:

2009

Language:

english

File:

PDF, 139 KB

english, 2009

36

Folding transitions in three-dimensional space with defects

Emilio N.M. Cirillo, Giuseppe Gonnella, Alessandro Pelizzola

Journal:

Nuclear Physics B

Year:

2012

Language:

english

File:

PDF, 387 KB

english, 2012

37

Distinct Epigenomic Landscapes of Pluripotent and Lineage-Committed Human Cells

R. David Hawkins, Gary C. Hon, Leonard K. Lee, QueMinh Ngo, Ryan Lister, Mattia Pelizzola, Lee E. Edsall, Samantha Kuan, Ying Luu, Sarit Klugman, Jessica Antosiewicz-Bourget, Zhen Ye, Celso Espinoza,

Journal:

Year:

2010

Language:

english

File:

PDF, 2.23 MB

english, 2010

38

Folding transitions of the square-diagonal two-dimensional lattice

Emilio N.M. Cirillo, Giuseppe Gonnella, Alessandro Pelizzola

Journal:

Nuclear Physics B

Year:

2000

Language:

english

File:

PDF, 166 KB

english, 2000

39

Critical behaviour of the three-dimensional gonihedric Ising model

E.N.M. Cirillo, G. Gonnella, A. Pelizzola

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

1998

Language:

english

File:

PDF, 244 KB

english, 1998

40

Comparison between single saturating dose ligand binding assay and enzyme immunoassay for low-salt extractable oestrogen and progesterone receptors in breast cancer: A multicentre study

Massimo Gion, Ruggero Dittadi, Antonette E. Leon, Giuliano Bruscagnin, Dario Pelizzola, Gloria Giovannini, Melchiorre Giganti, Gianni Messeri, Massimo Quercioli, Emanuela Flamini, Angela Riccobon, Cec

Journal:

European Journal of Cancer and Clinical Oncology

Year:

1991

Language:

english

File:

PDF, 917 KB

english, 1991

41

Patterns of population epigenomic diversity

Schmitz, Robert J., Schultz, Matthew D., Urich, Mark A., Nery, Joseph R., Pelizzola, Mattia, Libiger, Ondrej, Alix, Andrew, McCosh, Richard B., Chen, Huaming, Schork, Nicholas J., Ecker, Joseph R.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.70 MB

english, 2013

42

Bethe approximation for a model of polymer solvation

Bruscolini, P., Buzano, C., Pelizzola, A., Pretti, M.

Journal:

Physical Review E

Year:

2001

Language:

english

File:

PDF, 62 KB

english, 2001

43

Microarray-based analysis of recombinant protein production inE. coli

Ronan O'Dwyer, Xuejun Hu, Mattia Pelizzola, Olga Kolaj…

Journal:

Microbial Cell Factories

Year:

2006

Language:

english

File:

PDF, 741 KB

english, 2006

44

Rate Determining Factors in Protein Model Structures

Bruscolini, Pierpaolo, Pelizzola, Alessandro, Zamparo, Marco

Journal:

Physical Review Letters

Year:

2007

Language:

english

File:

PDF, 140 KB

english, 2007

45

Critical behavior of the three-dimensional Ising model with nearest-neighbor, next-nearest-neighbor, and plaquette interactions

Cirillo, Emilio N. M., Gonnella, G., Pelizzola, A.

Journal:

Physical Review E

Year:

1997

Language:

english

File:

PDF, 85 KB

english, 1997

46

Cluster variation method in statistical physics and probabilistic graphical models

Pelizzola, Alessandro

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2005

Language:

english

File:

PDF, 363 KB

english, 2005

47

Interlaboratory evaluation of milk fatty acid composition by using different GC operating conditions

Contarini, Giovanna, Povolo, Milena, Pelizzola, Valeria, Monti, Lucia, Lercker, Giovanni

Journal:

Journal of Food Composition and Analysis

Year:

2013

Language:

english

File:

PDF, 752 KB

english, 2013

48

TREATMENT OF ACUTE RESPIRATORY FAILURE WITH LOW-FREQUENCY POSITIVE-PRESSURE VENTILATION AND EXTRACORPOREAL REMOVAL OF CO2

Gattinoni, L., Pesenti, A., Rossi, G.P., Vesconi, S., Fox, U., Kolobow, T., Agostoni, A., Pelizzola, A., Langer, M., Uziel, L.

Journal:

Year:

1980

Language:

english

File:

PDF, 436 KB

english, 1980

49

AMIODARONE AND THE THYROID

Piffanelli, Adriano, Pelizzola, Dario, Ricci, Luciano, Codecá, Luciano, Masoni, Antonio, Romelli, PierBruno

Journal:

Year:

1979

Language:

english

File:

PDF, 150 KB

english, 1979

50

Generalized belief propagation for the magnetization of the simple cubic Ising model

Pelizzola, Alessandro

Journal:

Nuclear Physics B

Year:

2014

Language:

english

File:

PDF, 235 KB

english, 2014

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